Polarity gradient issues in differential centrifugation of complex lipid mixtures
https://doi.org/10.21285/2227-2925-2019-9-3-519-528
Abstract
About the Authors
V. A. SarkisyanRussian Federation
Ph.D. (Biology), Senior Researcher,
Moscow
Yu. V. Frolova
Russian Federation
Researcher,
Moscow
V. A. Shipelin
Russian Federation
Ph.D. (Medicine), Senior Researcher,
Moscow
V. M. Kodentsova
Russian Federation
Dr. Sci. (Biology), Professor, Lead Researcher,
Moscow
A. A. Kochetkova
Russian Federation
Dr. Sci. (Engineering), Professor, Head of the Laboratory,
Moscow
References
1. Orešič M., Hänninen V. A., Vidal-Puig A. Lipidomics: a new window to biomedical frontiers. Trends in biotechnology. 2008, vol. 26, issue 12, pp. 647–652. DOI: 10.1016/j.tibtech.2008.09.001
2. Pietiläinen K.H., Róg T., Seppänen-Laakso T., Virtue S., Gopalacharyulu P., Tang J., RodriguezCuenca S., Maciejewski A., Naukkarinen J., Ruskeepää A.L., Niemelä P.S., Yetukuri L., Tan C.Y., Velagapudi V., Castillo S., Nygren H., Hyötyläinen T., Rissanen A., Kaprio J., Yki-Järvinen H., Vattulainen I., Vidal-Puig A., Orešič M. Association of lipidome remodeling in the adipocyte membrane with acquired obesity in humans. PLoS biology. 2011, vol. 9, no. 6, pp. e1000623. DOI: 10.1371/journal.pbio.1000623
3. Kaddurah-Daouk R., McEvoy J., Baillie R.A., Lee D., Yao J.K., Doraiswamy P.M., Krishnan K.R.R. Metabolomic mapping of atypical antipsychotic effects in schizophrenia. Molecular psychiatry. 2007, vol. 12, no. 10, pp. 934–945.
4. Han X., Holtzman D.M., McKeel Jr D.W. Plasmalogen deficiency in early Alzheimer's disease subjects and in animal models: molecular characterization using electrospray ionization mass spectrometry. Journal of neurochemistry. 2001, vol. 77, no. 4. pp. 1168–1180. DOI: 10.1046/j.1471-4159.2001.00332.x
5. Haughey N.J., Steiner J., Nath A., McArthur, Sacktor N., Pardo C., Bandaru V.V.R. Converging roles for sphingolipids and cell stress in the progression of neurological dysfunction in AIDS. Frontiers in bioscience: a journal and virtual library. 2008, vol. 13, pp. 5120–5130.
6. Angelini R., Vitale R., Patil V.A., Cocco T., Ludwig B., Greenberg M.L., Corcelli A. Lipidomics of intact mitochondria by MALDI-TOF/MS. Journal of lipid research. 2012, vol. 53, no. 7, pp. 1417–1425.
7. Akmurzina V.A., Selishcheva A.A., Shvets V.I. From lipid analysis to lipidomics. Tonkie khimicheskie tekhnologii. 2012, vol. 7, no. 6, pp. 3–21. (In Russian)
8. Wang T., Zhou D. Advances in phospholipid quantification methods. Current Opinion in Food Science. 2017, vol. 16, pp. 15–20. DOI: 10.1016/j.cofs.2017.06.007
9. Brasaemle D.L., Wolins N.E. Isolation of lipid droplets from cells by density gradient centrifugation. Current protocols in cell biology. 2016, vol. 72, no. 1, pp. 3–15. DOI: 10.1002/cpcb.10
10. Hara A., Radin N.S. Lipid extraction of tissues with a low-toxicity solvent. Analytical Biochemistry. 1978, vol. 90, no. 1, pp. 420–426. DOI: 10.1016/0003-2697(78)90046-5
11. Stetefeld J., McKenna S.A., Patel T.R. Dynamic light scattering: a practical guide and applications in biomedical sciences. Biophysical Reviews. 2016, vol. 8, pp. 409–427. DOI: 10.1007/s12551-016-0218-6
12. Siepmann J., Siepmann F. Mathematical modeling of drug dissolution. International journal of pharmaceutics. 2013, vol. 453, no. 1, pp. 12–24.
13. Seager R.J., Acevedo A.J., Spill F., Zaman M.H. Solid dissolution in a fluid solvent is characterized by the interplay of surface area-dependent diffusion and physical fragmentation. Scientific reports. 2018, vol. 8, no. 1, pp. 7711.
14. Boger E., Wigström O. A Partial Differential Equation Approach to Inhalation Physiologically Based Pharmacokinetic Modeling. CPT: Pharmacometrics Systems Pharmacology. 2018, vol. 7, no. 10, pp. 638–646. DOI:10.1002/psp4.12344
15. Livshits M.A., Khomyakova E., Evtushenko E.G., Lazarev V.N., Kulemin N.A., Semina S.E., Generozov E.V., Govorun V.M. Isolation of exosomes by differential centrifugation: Theoretical analysis of a commonly used protocol. Scientific Reports. 2015, vol. 5, pp. 17319. DOI: 10.1038/srep17319
16. Van Krevelen D.W., Te Nijenhuis K. Properties of polymers: their correlation with chemical structure; their numerical estimation and prediction from additive group contributions. Elsevier, 2009, 1004 p.
17. Hansen C.M. Hansen solubility parameters: a user´s handbook. 2nd ed. CRC Press, 2007, 544 p.
18. Verheyen S., Augustijns P., Kinget R., Van den Mooter G. Determination of partial solubility parameters of five benzodiazepines in individual solvents. International journal of pharmaceutics. 2001, vol. 228, no. 1-2, pp. 199–207.
19. Folch J., Lees M., Sloane Stanley G.H. A simple method for the isolation and purification of total lipides from animal tissues. J Biol Chem. 1957, vol. 226, no 1, pp. 497–509.
20. Dreissig I., Machill S., Salzer R., Krafft C. Quantification of brain lipids by FTIR spectroscopy and partial least squares regression. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. 2009, vol. 71, no. 5, pp. 2069–2075. DOI: 10.1016/j.saa.2008.08.008
Review
For citations:
Sarkisyan V.A., Frolova Yu.V., Shipelin V.A., Kodentsova V.M., Kochetkova A.A. Polarity gradient issues in differential centrifugation of complex lipid mixtures. Proceedings of Universities. Applied Chemistry and Biotechnology. 2019;9(3):519-528. (In Russ.) https://doi.org/10.21285/2227-2925-2019-9-3-519-528